In order to achieve this we want to identify novel genes responsible for cortical malformations (Figure 2) by mapping the genome of patients that do not have mutations in the ‘usual suspect’ genes (in collaboration with Dr. Stephen Robertson - human geneticist, University of Otago, New Zealand). We can then generate mouse models to investigate the molecular and cellular mechanisms underlying these diseases by gain and loss of function (Figure 3).
Furthermore, we will characterize the functional aspects of these disorders by using our mouse models of cortical malformations (Cappello et al., Neuron 2012; Cappello et al., Nature Genetics 2013; Schimd et al., Frontiers in Neuroscience 2014) to address long-standing questions that are very difficult to directly address in human patients: how connectivity between heterotopias is established and what is the neuronal composition as well as behavior and electrophysiological properties of the ectopic neurons. Finally we will study the molecular, cellular and functional properties of human reprogrammed neural stem cells and neurons derived from patients and generate cerebral organoids to mimic the human brain (Figure 4).
In this way, we will be able to screen for several candidate genes identified from human patients as well as from known mouse models and assemble a network of genes and possible pathways responsible for cortical malformations.
With these methods, we will be able to significantly contribute towards the identification of strategies for therapeutic approaches, like for instance the re-expression of mutant genes or modulation of cytoskeleton stability. We also hope to develop a genetic test to screen for susceptibility, e.g. for epilepsy, at a very early stage of development.
Performing RNA sequencing and proteomics of different populations of human cells (e.g. neural stem cells versus neurons, or control versus mutant reprogrammed neurons) will ultimately enable us to define gene networks and pathways involved. This approach together with an appropriate functional analysis of the mouse models (e.g. functional MRI) will give us new ideas in order to discover new targets for drug therapies.